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The Open Protein Structure Annotation Network
PDB Keyword
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PF04038

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF04038 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2i522iec2ogf
      

    Resources
    Pfam ID: DUF381 PDB: 2i52_A
    Solved by: NYSGXRC    
    FFAS:(view)
      Top FFAS hit in PDB: "2i52A, Hypothetical protein" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "2iecA, structural genomics, unknown function ; crystal structure of uncharacterized conserved archael protein from methanopyrus kandleri "
    CATH: CATH Domain E-value CATH Node
      2ogfA00 5.10E-13 3.30.1300.20
    PUBSERVER: (view)
      Publications(s) found: 57
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver
      PDBBLAST PDB: 2iec_A SCOP : predicted d.316.1.1
      MGENTHREADER PDB: 2iec_A SCOP : predicted d.316.1.1
      PRC PDB: 2i52_A SCOP : predicted d.316.1.1
      BLASTP PDB: 2i52_A SCOP : predicted d.316.1.1
      HHBLITS PDB: 2i52_A SCOP : predicted d.316.1.1
      COMPASS PDB: 2iec_A SCOP : predicted d.316.1.1
      CSBLAST PDB: 2i52_A SCOP : predicted d.316.1.1
      HHSEARCH PDB: 2i52_A SCOP : predicted d.316.1.1

    Topsan Members

    Tag pages as 'PF04038' to appear in this list.

    Name Annotation Author(s)
    2i52

    Summary

    Pfam family PFAM:PF04038 {Domain of unknown function (DUF381) } with 29 members in NR database and additional 5 members in the metagenomic datasets is represented in Archaea. The first structural representative solved (PDB Id: TOPSAN:2i52) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

    Reviews

    References

     

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