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The Open Protein Structure Annotation Network
PDB Keyword
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PF04237

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF04237 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2a1v2fki2kfp3h9x
      

    Resources
    Pfam ID: DUF419 PDB: 2a1v_A
    Solved by: NYSGXRC    
    FFAS:(view)
      Top FFAS hit in PDB: "2kfpA, PSPTO_3016 protein" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "2fkiA, structural genomics, unknown function ; nmr structure of protein yjbr from escherichia coli; northeast structural genomics consortium target er226 "
    CATH: CATH Domain E-value CATH Node
      2kfpA00 9.10E-28
    PUBSERVER: (view)
      Publications(s) found: 648
      Publications(s) meeting filtering criteria: 7
    GeneSilico Metaserver
      PDBBLAST PDB: 2a1v_A SCOP : predicted d.198.3.1 ECC: predicted 2.8.-.-
      FFAS PDB: 2fki_A SCOP : predicted d.198.3.1
      MGENTHREADER PDB: 2fki_A SCOP : predicted d.198.3.1
      PRC PDB: 2a1v_A SCOP : predicted d.198.3.1 ECC: predicted 2.8.-.-
      BLASTP PDB: 2a1v_A SCOP : predicted d.198.3.1 ECC: predicted 2.8.-.-
      HHBLITS PDB: 2fki_A SCOP : predicted d.198.3.1
      COMPASS PDB: 2fki_A SCOP : predicted d.198.3.1
      CSBLAST PDB: 2a1v_A SCOP : predicted d.198.3.1 ECC: predicted 2.8.-.-
      HHSEARCH PDB: 2fki_A SCOP : predicted d.198.3.1
    E.coli Annotations
    NCBI: 16128562 PORTECO PORAL: ybdF  GeneExpDB: b0579 

    Topsan Members

    Tag pages as 'PF04237' to appear in this list.

    Name Annotation Author(s)
    2a1v

    Summary

    Pfam family PFAM:PF04237 {Protein of unknown function (DUF419) } with 266 members in NR database and additional 90 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2a1v) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1s28a_ classified as Secretion chaperone-like fold. However, no sequence similarity to this fold has been detected.

    Reviews

    References

     

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