.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF04356

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF04356 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1qz41sdi
      

    Resources
    Pfam ID: DUF489 PDB: 1qz4_A
    Solved by: MCSG    
    FFAS:(view)
      Top FFAS hit in PDB: "1qz4A, Hypothetical protein ycfC" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "1qz4A, structural genomics, unknown function ; structure of hypothetical escherichia coli protein ycfc "
    CATH: CATH Domain E-value CATH Node
      1sdiA00 7.50E-74 1.10.3890.10
    PUBSERVER: (view)
      Publications(s) found: 483
      Publications(s) meeting filtering criteria: 3
    GeneSilico Metaserver
      PDBBLAST PDB: 1sdi_A SCOP : a.198.1.1
      FFAS PDB: 1qz4_A SCOP : a.198.1.1
      MGENTHREADER PDB: 1sdi_A SCOP : a.198.1.1
      PRC PDB: 1qz4_A SCOP : a.198.1.1
      SPARKS PDB: 1qz4_A SCOP : a.198.1.1
      BLASTP PDB: 1sdi_A SCOP : a.198.1.1
      HHBLITS PDB: 1sdi_A SCOP : a.198.1.1
      COMPASS PDB: 1qz4_A SCOP : a.198.1.1
      CSBLAST PDB: 1sdi_A SCOP : a.198.1.1
      HHSEARCH PDB: 1sdi_A SCOP : a.198.1.1
    E.coli Annotations
    NCBI: 16129095 PORTECO PORAL: hflD  GeneExpDB: b1132 

    Topsan Members

    Tag pages as 'PF04356' to appear in this list.

    Name Annotation Author(s)
    1qz4

    Summary

    Pfam family PFAM:PF04356 {Protein of unknown function (DUF489)} with 240 members in NR database and additional 99 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:1qz4) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch