The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    Live PFAM
    Name: Accession: PF06439 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  3h3l3hbk3imm3nmb3osd

    Pfam ID: DUF1080 PDB: 3h3l_A
    Solved by: non-psi    
      Top FFAS hit in PDB: "3osdA, putative glycosyl hydrolase" Top FFAS hit in Pfam: "PF09224, Domain of unknown function (DUF1961) "
      Top significant hit (PDB90): "3s5qA, hydrolase ; crystal structure of a hypothetical glycosyl hydrolase (bdi_2473) from parabacteroides distasonis atcc 8503 at 1.85 a resolution "
      Top significant hit (PFAM25U): "PF02057, Glycosyl hydrolase family 59"
    CATH: CATH Domain E-value CATH Node
      1z78A00 0.001
      1s0iA02 0.0097
    FUNFAM (eval=0.0013 ): Levanbiose-producing levanase -like
    PUBSERVER: (view)
      Publications(s) found: 101
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver
      PDBBLAST PDB: 3h3l_A SCOP : predicted b.29.1.16
      FFAS PDB: 3h3l_A SCOP : predicted b.29.1.16
      BLASTP PDB: 3osd_A
      HHBLITS PDB: 3h3l_A SCOP : predicted b.29.1.16
      COMPASS PDB: 1gbg_A SCOP : b.29.1.2 ECC:
      COMA PDB: 3nmb_A SCOP : predicted b.29.1.16 ECC: predicted 3.6.-.-
      CSBLAST PDB: 3osd_A
      HHSEARCH PDB: 3osd_A

    Topsan Members

    Tag pages as 'PF06439' to appear in this list.

    Name Annotation Author(s)
    Pfam Update: This protein is now in family PF06439.4 DUF1080 CL0004 Glycosyl hydrolase along with other structures. Gene BDI_2876 from Parabacteroides distasonis atcc 8503 encodes the YP_001304206 pro... haxelrod (8 edits)
    pascual (2 edits)


    DUF1080 needs to be substituted by "glycosyl hydrolase".




    No references found.

    Tag page

    Files (0)

    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch