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The Open Protein Structure Annotation Network
PDB Keyword
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PF06855

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF06855 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2fj62kvs2o6k
      

    Resources
    Pfam ID: DUF1250 PDB: 2fj6_A
    Solved by: NESG    
    FFAS:(view)
      Top FFAS hit in PDB: "2fj6A, Hypothetical UPF0346 protein yozE" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "2fj6A, structural genomics, unknown function ; solution nmr structure of the upf0346 protein yoze from bacillus subtilis. northeast structural genomics target sr391. "
    CATH: CATH Domain E-value CATH Node
      2fj6A01 6.50E-16 1.10.150.260
    PUBSERVER: (view)
      Publications(s) found: 260
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver
      PDBBLAST PDB: 2o6k_A
      MGENTHREADER PDB: 2fj6_A SCOP : predicted a.60.15.1
      PRC PDB: 2fj6_A SCOP : predicted a.60.15.1
      BLASTP PDB: 2o6k_A
      HHBLITS PDB: 2o6k_A
      COMPASS PDB: 2fj6_A SCOP : predicted a.60.15.1
      COMA PDB: 2fj6_A SCOP : predicted a.60.15.1
      CSBLAST PDB: 2o6k_A
      HHSEARCH PDB: 2o6k_A

    Topsan Members

    Tag pages as 'PF06855' to appear in this list.

    Name Annotation Author(s)
    2fj6

    Summary

    Pfam family PFAM:PF06855 {Protein of unknown function (DUF1250)} with 159 members in NR database and additional 1 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2fj6) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1a0pa1 classified as SAM domain-like fold. However, no sequence similarity to this fold has been detected.

    Reviews

    References

     

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