The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF06865 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2oyz3eo63hqx

    Pfam ID: DUF1255 PDB: 2oyz_A
    Solved by: MCSG    
      Top FFAS hit in PDB: "3eo6A, protein of unknown function (DUF1255)" Top FFAS hit in Pfam: "PF06249, Ethanolamine utilisation protein EutQ "
      Top significant hit (PDB90): "2oyzA, structural genomics, unknown function ; crystal structure of unknown function protein vpa0057 from vibrio parahaemolyticus (targeted domain 2-94) "
      Top significant hit (PFAM25U): "PF05899, Protein of unknown function (DUF861)"
    CATH: CATH Domain E-value CATH Node
      3i7dB00 0.0096
      1lr5B00 0.0096
    PUBSERVER: (view)
      Publications(s) found: 520
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver
      PDBBLAST PDB: 3hqx_A SCOP : predicted b.82.1.5
      FFAS PDB: 2oyz_A SCOP : predicted b.82.1.9
      MGENTHREADER PDB: 2oyz_A SCOP : predicted b.82.1.9
      BLASTP PDB: 2oyz_A SCOP : predicted b.82.1.9
      HHBLITS PDB: 3bcw_A SCOP : predicted b.82.1.8
      COMPASS PDB: 2oyz_A SCOP : predicted b.82.1.9
      CSBLAST PDB: 2oyz_A SCOP : predicted b.82.1.9
      HHSEARCH PDB: 3eo6_A SCOP : predicted b.82.1.8
    E.coli Annotations
    NCBI: 16128376 PORTECO PORAL: yaiE  GeneExpDB: b0391 

    Topsan Members

    Tag pages as 'PF06865' to appear in this list.

    Name Annotation Author(s)


    Pfam family PFAM:PF06865 {Protein of unknown function (DUF1255)} with 260 members in NR database and additional 128 members in the metagenomic datasets is represented in Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2oyz) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1vj2a_ classified as Double-stranded beta-helix fold. Profile-profile methods confirm remote homology between this family and superfamily of RmlC-like cupins; Double-stranded beta-helix fold.




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