The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF06998 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2joe

    Pfam ID: DUF1307 PDB: 2joe_A
    Solved by: NESG    
      Top FFAS hit in PDB: "2joeA, Hypothetical lipoprotein yehR" No significant hits in Pfam.
      Top significant hit (PDB90): "2joeA, structural genomics, unknown function ; nmr structure of e. coli yehr protein. northeast structural genomics target er538. "
    CATH: CATH Domain E-value CATH Node
      2joeA01 1.20E-40 3.30.1830.10
    PUBSERVER: (view)
      Publications(s) found: 301
      Publications(s) meeting filtering criteria: 3
    GeneSilico Metaserver
      FFAS PDB: 2joe_A
      HHBLITS PDB: 2joe_A
      COMPASS PDB: 2joe_A
      COMA PDB: 2joe_A
      HHSEARCH PDB: 2joe_A
    E.coli Annotations
    NCBI: 90111391 PORTECO PORAL: yehR  GeneExpDB: b2123 

    Topsan Members

    Tag pages as 'PF06998' to appear in this list.

    Name Annotation Author(s)


    Pfam family PFAM:PF06998 {Protein of unknown function (DUF1307)} with 70 members in NR database. The first structural representative solved (PDB Id: TOPSAN:2joe) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1xkpb1 classified as Secretion chaperone-like fold. (Note: additional/lacking secondary structure elements). However, no sequence similarity to this fold has been detected.




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