The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF07286 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2pif3db9

    Pfam ID: DUF1445 PDB: 2pif_A
    Solved by: NESG    
      Top FFAS hit in PDB: "3db9A, UPF0317 protein Atu3911" No significant hits in Pfam.
      Top significant hit (PDB90): "2pifA, structural genomics, unknown function ; crystal structure of upf0317 protein pspto_5379 from pseudomonas syringae pv. tomato. northeast structural genomics target psr181 "
      Top significant hit (PFAM25U): "PF01995, Domain of unknown function DUF128"
    CATH: CATH Domain E-value CATH Node
      2pifA02 2.50E-49 3.30.2040.10
      2pifA01 1.20E-17 3.40.1640.10
    FUNFAM (eval=0 ): UPF0317 protein C5H10.01 -like
    PUBSERVER: (view)
      Publications(s) found: 283
      Publications(s) meeting filtering criteria: 2
    GeneSilico Metaserver
      PDBBLAST PDB: 2pif_A
      FFAS PDB: 3db9_A
      BLASTP PDB: 3db9_A
      HHBLITS PDB: 2pif_A
      COMPASS PDB: 2pif_A
      COMA PDB: 2pif_A
      CSBLAST PDB: 2pif_A
      HHSEARCH PDB: 2pif_A

    Topsan Members

    Tag pages as 'PF07286' to appear in this list.

    Name Annotation Author(s)


    Pfam family PFAM:PF07286 {Protein of unknown function (DUF1445)} with 347 members in NR database and additional 207 members in the metagenomic datasets is represented in Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2pif) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.




    No references found.

    Tag page

    Files (0)

    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch