The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF07515 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2ipq3kq5

    Pfam ID: DUF1528 PDB: 2ipq_X
    Solved by: NYSGXRC    
      Top FFAS hit in PDB: "2ipqX, Hypothetical protein STY4665" No significant hits in Pfam.
      Top significant hit (PDB90): "2ipqX, structural genomics, unknown function ; crystal structure of c-terminal domain of salmonella enterica protein sty4665, pfam duf1528 "
    CATH: CATH Domain E-value CATH Node
      2ipqX02 5.00E-14
    PUBSERVER: (view)
      Publications(s) found: 132
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver
      PDBBLAST PDB: 2ipq_X
      FFAS PDB: 2ipq_X
      BLASTP PDB: 2ipq_X
      HHBLITS PDB: 2ipq_X
      COMPASS PDB: 2ipq_X
      CSBLAST PDB: 2ipq_X
      HHSEARCH PDB: 2ipq_X

    Topsan Members

    Tag pages as 'PF07515' to appear in this list.

    Name Annotation Author(s)


    Pfam family PFAM:PF07515 {Protein of unknown function (DUF1528) } with 89 members in NR database and additional 6 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2ipq) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1i5za1 classified as DNA/RNA-binding 3-helical bundle fold. However, no sequence similarity to this fold has been detected. Based on fold one can hypothesize that this family is probably binds nucleic acids




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