.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF08338

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    Live PFAM
    Name: Accession: PF08338 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  3oh84b4o
      

    Resources
    Pfam ID: DUF1731 PDB: 3oh8_A
    Solved by: NESG    
    FFAS:(view)
      Top FFAS hit in PDB: "3oh8A, Nucleoside-diphosphate sugar epimerase (SulA" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "3oh8A, isomerase ; crystal structure of the nucleoside-diphosphate sugar epimerase from corynebacterium glutamicum. northeast structural genomics consortium target cgr91 "
    CATH: CATH Domain E-value CATH Node
      3gpiA00 0.0059
    PUBSERVER: (view)
      Publications(s) found: 1008
      Publications(s) meeting filtering criteria: 3
    GeneSilico Metaserver
      HHBLITS PDB: 2c20_A SCOP : predicted c.2.1.2 ECC: 5.1.3.2
      HHSEARCH PDB: 3oh8_A SCOP : predicted c.2.1 ECC: predicted 1.1.-.-
    E.coli Annotations
    NCBI: 16130239 PORTECO PORAL: yfcH  GeneExpDB: b2304 

    Topsan Members

    Tag pages as 'PF08338' to appear in this list.

    No TOPSAN member(s) found.

    Summary

    This DUF is an extension of the epimerase domain.  Either the epimerase domain should be extend to include this regions, or the DUF should be extended to cover the epimerase domain, and be included in the clan.  Failing that, kill the DUF - agreed by Rob and Aravind.

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch