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PDB Keyword
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PF08768

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF08768 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2a132fr22fwv2q4n3emm
      

    Resources
    Pfam ID: DUF1794 PDB: 2a13_A
    Solved by: CESG    
    FFAS:(view)
      Top FFAS hit in PDB: "2fwvA, hypothetical protein MtubF_01000852" Top FFAS hit in Pfam: "PF07617, Protein of unknown function (DUF1579) "
    Meta-Basic:
      Top significant hit (PDB90): "2fwvA, structural genomics, unknown function ; crystal structure of rv0813 "
      Top significant hit (PFAM25U): "PF07617, Protein of unknown function (DUF1579)"
    CATH: CATH Domain E-value CATH Node
      2a13A00 3.30E-49
      1jvaB02 0.0048 3.10.28.10
    PUBSERVER: (view)
      Publications(s) found: 236
      Publications(s) meeting filtering criteria: 5
    GeneSilico Metaserver
      PDBBLAST PDB: 2q4n_A SCOP : predicted b.60.1.8 ECC: predicted 2.8.-.-
      FFAS PDB: 2fr2_A SCOP : predicted b.60.1.8
      PRC PDB: 2a13_A SCOP : predicted b.60.1.8 ECC: predicted 2.8.-.-
      BLASTP PDB: 2fwv_A SCOP : predicted b.60.1.8
      HHBLITS PDB: 2fwv_A SCOP : predicted b.60.1.8
      COMPASS PDB: 2a13_A SCOP : predicted b.60.1.8 ECC: predicted 2.8.-.-
      CSBLAST PDB: 2q4n_A SCOP : predicted b.60.1.8 ECC: predicted 2.8.-.-
      HHSEARCH PDB: 2fwv_A SCOP : predicted b.60.1.8

    Topsan Members

    Tag pages as 'PF08768' to appear in this list.

    Name Annotation Author(s)
    2a13

    Summary

    Pfam family PFAM:PF08768 {Domain of unknown function (DUF1794) } with 239 members in NR database and additional 107 members in the metagenomic datasets is represented in Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2a13) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1sa8a_ classified as Lipocalins fold. Based on marginal prediction from FFAS confirmed by structural similarity one can argue that this family is remotely homologous to previously known structures from 'd1sa8a_' this fold.

    Reviews

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