.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF08921

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF08921 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1u9d
      

    Resources
    Pfam ID: DUF1904 PDB: 1u9d_A
    Solved by: MCSG    
    FFAS:(view)
      Top FFAS hit in PDB: "1u9dA, hypothetical protein VC0714" Top FFAS hit in Pfam: "PF01187, Macrophage migration inhibitory factor (MIF) "
    Meta-Basic:
      Top significant hit (PDB90): "1u9dA, structural genomics, unknown function ; hypothetical protein from vibrio cholerae o1 biovar eltor str. n16961 "
      Top significant hit (PFAM25U): "PF01187, Macrophage migration inhibitory factor (MIF)"
    CATH: CATH Domain E-value CATH Node
      2aalF00 0.00034
      1mwwB00 0.0065 3.30.429.10
    FUNFAM (eval=0.0047 ): 4-oxalocrotonate tautomerase -like
    PUBSERVER: (view)
      Publications(s) found: 66
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver
      FFAS PDB: 1u9d_A SCOP : d.80.1.5
      PHYRE PDB: 1u9d_A SCOP : d.80.1.5
      PRC PDB: 1u9d_A SCOP : d.80.1.5
      SPARKS PDB: 1u9d_A SCOP : d.80.1.5
      HHBLITS PDB: 1u9d_A SCOP : d.80.1.5
      COMPASS PDB: 1u9d_A SCOP : d.80.1.5
      COMA PDB: 1u9d_A SCOP : d.80.1.5
      HHSEARCH PDB: 1u9d_A SCOP : d.80.1.5

    Topsan Members

    Tag pages as 'PF08921' to appear in this list.

    Name Annotation Author(s)
    1u9d

    Summary

    Pfam family PFAM:PF08921 {Domain of unknown function (DUF1904) } with 35 members in NR database and additional 1 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:1u9d) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1mwwa_ classified as Tautomerase/MIF fold. Profile-profile methods confirm remote homology between this family and superfamily of Tautomerase/MIF; fold of the same name.

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch