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PF08956

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF08956 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1nei
      

    Resources
    Pfam ID: DUF1869 PDB: 1nei_A
    Solved by: NESG    
    FFAS:(view)
      Top FFAS hit in PDB: "1neiA, hypothetical protein yoaG" No significant hits in Pfam.
    CATH: CATH Domain E-value CATH Node
      1neiA00 4.00E-24 3.30.160.220
    PUBSERVER: (view)
      Publications(s) found: 227
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver
      FFAS PDB: 1nei_A SCOP : d.253.1.1
      PHYRE PDB: 1nei_A SCOP : d.253.1.1
      MGENTHREADER PDB: 1nei_A SCOP : d.253.1.1
      PRC PDB: 1nei_A SCOP : d.253.1.1
      SPARKS PDB: 1nei_A SCOP : d.253.1.1
      HHBLITS PDB: 1nei_A SCOP : d.253.1.1
      COMPASS PDB: 1nei_A SCOP : d.253.1.1
      HHSEARCH PDB: 1nei_A SCOP : d.253.1.1
    E.coli Annotations
    NCBI: 16129750 PORTECO PORAL: yoaG  GeneExpDB: b1796 

    Topsan Members

    Tag pages as 'PF08956' to appear in this list.

    Name Annotation Author(s)
    1nei

    Summary

    Pfam family PFAM:PF08956 {Domain of unknown function (DUF1869)} with 26 members in NR database and additional 1 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:1nei) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1qyna_ classified as Hypothetical protein yoag fold. (Note: new fold solved by PSI). However, this partial similarity is not sufficient for fold assignment. Thus it is a novel fold.

    Reviews

    References

     

    No references found.

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