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PDB Keyword
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PF08974

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF08974 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1ryl
      

    Resources
    Pfam ID: DUF1877 PDB: 1ryl_A
    Solved by: MCSG    
    FFAS:(view)
      Top FFAS hit in PDB: "1rylA, Hypothetical protein yfbM" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "1rylA, structural genomics, unknown function ; structural genomics,the crystal structure of a hypothetical protein yfbm from e. coli "
    CATH: CATH Domain E-value CATH Node
      1rylA00 1.20E-46 3.40.1760.10
    PUBSERVER: (view)
      Publications(s) found: 245
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver
      PDBBLAST PDB: 1ryl_A SCOP : d.276.1.1
      FFAS PDB: 1ryl_A SCOP : d.276.1.1
      MGENTHREADER PDB: 1ryl_A SCOP : d.276.1.1
      PRC PDB: 1ryl_A SCOP : d.276.1.1
      SPARKS PDB: 1ryl_A SCOP : d.276.1.1
      BLASTP PDB: 1ryl_A SCOP : d.276.1.1
      HHBLITS PDB: 1ryl_A SCOP : d.276.1.1
      COMPASS PDB: 1ryl_A SCOP : d.276.1.1
      COMA PDB: 1ryl_A SCOP : d.276.1.1
      CSBLAST PDB: 1ryl_A SCOP : d.276.1.1
      HHSEARCH PDB: 1ryl_A SCOP : d.276.1.1
    E.coli Annotations
    NCBI: 16130207 PORTECO PORAL: yfbM  GeneExpDB: b2272 

    Topsan Members

    Tag pages as 'PF08974' to appear in this list.

    Name Annotation Author(s)
    1ryl

    Summary

    Pfam family PFAM:PF08974 {Domain of unknown function (DUF1877) } with 34 members in NR database and additional 2 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:1ryl) was subject to FATCAT structural similarity search that yielded no results, thus suggesting that it is a novel fold.

    Reviews

    References

     

    No references found.

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