The Open Protein Structure Annotation Network
PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    Live PFAM
    Name: Accession: PF09011 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1aab1ckt1j3x1v642cto

    Pfam ID: DUF1898 PDB: 1aab_A
    Solved by: RSGI    
      Top FFAS hit in PDB: "2ctoA, novel protein" Top FFAS hit in Pfam: "PF00505, HMG (high mobility group) box "
      Top significant hit (PDB90): "1j3xA, dna binding protein ; solution structure of the n-terminal domain of the hmgb2 "
      Top significant hit (PFAM25U): "PF00505, HMG (high mobility group) box"
    CATH: CATH Domain E-value CATH Node
      1wgfA01 3.60E-11
      3fghA00 4.70E-14
    FUNFAM (eval=0 ): High mobility group protein homolog TDP-1 -like
    PUBSERVER: (view)
      Publications(s) found: 69
      Publications(s) meeting filtering criteria: 13
    GeneSilico Metaserver
      PDBBLAST PDB: 1ckt_A SCOP : a.21.1.1
      FFAS PDB: 1j3x_A SCOP : a.21.1.1
      MGENTHREADER PDB: 1ckt_A SCOP : a.21.1.1
      PRC PDB: 1v64_A SCOP : a.21.1.1 ECC: predicted 2.8.-.-
      BLASTP PDB: 1ckt_A SCOP : a.21.1.1
      HHBLITS PDB: 3f27_D SCOP : predicted a.21.1.1
      COMPASS PDB: 2cs1_A SCOP : predicted a.21.1.1
      COMA PDB: 1wgf_A SCOP : a.21.1.1 ECC: predicted 2.8.-.-
      CSBLAST PDB: 1ckt_A SCOP : a.21.1.1
      HHSEARCH PDB: 2co9_A SCOP : predicted a.21.1.1

    Topsan Members

    Tag pages as 'PF09011' to appear in this list.

    No TOPSAN member(s) found.


    This is a HMG-box (High Mobility Group box) domain which is involved in DNA binding.




    No references found.

    Tag page

    Files (0)

    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch