.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF09130

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF09130 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1i363qsg4ezb
      

    Resources
    Pfam ID: DUF1932 PDB: 1i36_A
    Solved by: MCSG    
    FFAS:(view)
      Top FFAS hit in PDB: "3qsgA, NAD-binding phosphogluconate dehydrogenase-li" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "1i36A, structural genomics, unknown function ; mth1747-conserved hypothetical protein reveals structural similarity with 3-hydroxyacid dehydrogenases "
    CATH: CATH Domain E-value CATH Node
      1i36A02 2.60E-19 1.10.1040.10
    PUBSERVER: (view)
      Publications(s) found: 80
      Publications(s) meeting filtering criteria: 6
    GeneSilico Metaserver
      PHYRE PDB: 1i36_A1 SCOP : a.100.1.8
      PRC PDB: 1i36_A SCOP : a.100.1.8
      HHBLITS PDB: 1yb4_A SCOP : predicted c.2.1 ECC: 1.1.1.60
      COMPASS PDB: 1i36_A SCOP : a.100.1.8
      HHSEARCH PDB: 1i36_A SCOP : a.100.1.8

    Topsan Members

    Tag pages as 'PF09130' to appear in this list.

    Name Annotation Author(s)
    1i36

    Summary

    Pfam family PFAM:PF09130 {Domain of unknown function (DUF1932)} with 139 members in NR database and additional 100 members in the metagenomic datasets is represented in Archaea, Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:1i36) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1dlja1 classified as 6-phosphogluconate dehydrogenase C-terminal domain-like fold. Based on Ligand one can argue that this family is remotely homologous to previously known structures from 'd1dlja1' this fold. Based on fold and evidence of homology, ligand one can hypothesize that this family is dehydrogenase

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch