.
The Open Protein Structure Annotation Network
PDB Keyword
.

PF09149

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF09149 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1r752fe0
      

    Resources
    Pfam ID: DUF1935 PDB: 1r75_A
    Solved by: SGPP    
    FFAS:(view)
      Top FFAS hit in PDB: "2fe0A, small myristoylated protein 1" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "2fe0A, protein transport, membrane protein ; nmr structure of smp-1 (small myristoylated protein) from leishmania major "
    CATH: CATH Domain E-value CATH Node
      1r75A00 3.40E-36 2.60.40.1180
    PUBSERVER: (view)
      Publications(s) found: 13
      Publications(s) meeting filtering criteria: 4
    GeneSilico Metaserver
      PDBBLAST PDB: 1r75_A SCOP : b.134.1.1
      FFAS PDB: 1r75_A SCOP : b.134.1.1
      MGENTHREADER PDB: 2fe0_A SCOP : predicted b.134.1.1
      PRC PDB: 1r75_A SCOP : b.134.1.1
      SPARKS PDB: 1r75_A SCOP : b.134.1.1
      BLASTP PDB: 1r75_A SCOP : b.134.1.1
      HHBLITS PDB: 2fe0_A SCOP : predicted b.134.1.1
      COMPASS PDB: 2fe0_A SCOP : predicted b.134.1.1
      COMA PDB: 1r75_A SCOP : b.134.1.1
      CSBLAST PDB: 1r75_A SCOP : b.134.1.1
      HHSEARCH PDB: 2fe0_A SCOP : predicted b.134.1.1

    Topsan Members

    Tag pages as 'PF09149' to appear in this list.

    Name Annotation Author(s)
    1r75

    Summary

    Pfam family PFAM:PF09149 {Domain of unknown function (DUF1935) } with 120 members in NR database. The first structural representative solved (PDB Id: TOPSAN:1r75) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1l4ia2 classified as SMP-1-like fold. (Note: new fold solved by PSI). However, this partial similarity is not sufficient for fold assignment. Thus it is a novel fold.

    Reviews

    References

     

    No references found.

    Tag page

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch