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The Open Protein Structure Annotation Network
PDB Keyword
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PF09155

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    3. 3. References
    Live PFAM
    Name: Accession: PF09155 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1nig
      

    Resources
    Pfam ID: DUF1940 PDB: 1nig_A
    Solved by: MCSG    
    FFAS:(view)
      Top FFAS hit in PDB: "1nigA, hypothetical protein TA1238" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "1nigA, structural genomics, unknown function ; 2.0 a structure of hypothetical protein from thermoplasma acidophilum "
    CATH: CATH Domain E-value CATH Node
      3ci3A01 0.006 1.20.1200.10
    PUBSERVER: (view)
      Publications(s) found: 4
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver
      PDBBLAST PDB: 1nig_A SCOP : a.25.2.1
      FFAS PDB: 1nig_A SCOP : a.25.2.1
      MGENTHREADER PDB: 1nig_A SCOP : a.25.2.1
      PRC PDB: 1nig_A SCOP : a.25.2.1
      SPARKS PDB: 1nig_A SCOP : a.25.2.1
      BLASTP PDB: 1nig_A SCOP : a.25.2.1
      HHBLITS PDB: 1rty_A SCOP : a.25.2.2
      COMPASS PDB: 1nig_A SCOP : a.25.2.1
      CSBLAST PDB: 1nig_A SCOP : a.25.2.1
      HHSEARCH PDB: 1nig_A SCOP : a.25.2.1

    Topsan Members

    Tag pages as 'PF09155' to appear in this list.

    Name Annotation Author(s)
    1nig

    Summary

    Pfam family PFAM:PF09155 {Domain of unknown function (DUF1940)} with 3 members in NR database and additional 4 members in the metagenomic datasets is represented in Archaea. The first structural representative solved (PDB Id: TOPSAN:1nig) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1ji5a_ classified as Ferritin-like fold. However, no sequence similarity to this fold has been detected. Based on sequence and structure analysis/ original paper one can hypothesize that this family is probably involved in cobalamin biosyntheses

    Reviews

    References

     

    No references found.

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