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PF09393

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF09393 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2guj
      

    Resources
    Pfam ID: DUF2001 PDB: 2guj_A
    Solved by: NESG    
    FFAS:(view)
      Top FFAS hit in PDB: "2gujA, Phage-like element PBSX protein xkdM" Top FFAS hit in Pfam: "PF05638, Protein of unknown function (DUF796) "
    Meta-Basic:
      Top significant hit (PDB90): "2gujA, structural genomics, unknown function ; three dimensional structure of the protein p54332 from bacillus subtilis. northeast structural genomics consortium target sr353. "
    CATH: CATH Domain E-value CATH Node
      2gujB01 1.40E-52
    PUBSERVER: (view)
      Publications(s) found: 71
      Publications(s) meeting filtering criteria: 0
    GeneSilico Metaserver
      PDBBLAST PDB: 2guj_A
      FFAS PDB: 2guj_A
      MGENTHREADER PDB: 2guj_A
      BLASTP PDB: 2guj_A
      HHBLITS PDB: 2guj_A
      COMPASS PDB: 2guj_A
      CSBLAST PDB: 2guj_A
      HHSEARCH PDB: 2guj_A

    Topsan Members

    Tag pages as 'PF09393' to appear in this list.

    Name Annotation Author(s)
    2guj

    Summary

    Pfam family PFAM:PF09393 {Protein of unknown function (DUF2001) } with 33 members in NR database and additional 3 members in the metagenomic datasets is represented in Bacteria, and Viruses. The first structural representative solved (PDB Id: TOPSAN:2guj) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1ylna2 classified as Hcp1-like fold. Based on marginal prediction from FFAS confirmed by structural similarity one can argue that this family is remotely homologous to previously known structures from 'd1ylna2' this fold.

    Reviews

    References

     

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