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The Open Protein Structure Annotation Network
PDB Keyword
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PF09400

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF09400 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  2g7j
      

    Resources
    Pfam ID: DUF2002 PDB: 2g7j_A
    Solved by: NESG    
    FFAS:(view)
      Top FFAS hit in PDB: "2g7jA, putative cytoplasmic protein" No significant hits in Pfam.
    Meta-Basic:
      Top significant hit (PDB90): "2g7jA, structural genomics, unknown function ; solution nmr structure of the putative cytoplasmic protein ygac from salmonella typhimurium. northeast structural genomics target str72. "
    CATH: CATH Domain E-value CATH Node
      2g7jA00 1.90E-50
    PUBSERVER: (view)
      Publications(s) found: 278
      Publications(s) meeting filtering criteria: 1
    GeneSilico Metaserver
      FFAS PDB: 2g7j_A
      PHYRE PDB: 2g7j_A
      MGENTHREADER PDB: 2g7j_A
      HHBLITS PDB: 2g7j_A
      COMPASS PDB: 2g7j_A
      HHSEARCH PDB: 2g7j_A
    E.coli Annotations
    NCBI: 16130585 PORTECO PORAL: ygaC  GeneExpDB: b2671 

    Topsan Members

    Tag pages as 'PF09400' to appear in this list.

    Name Annotation Author(s)
    2g7j

    Summary

    Pfam family PFAM:PF09400 {Protein of unknown function (DUF2002)} with 43 members in NR database and additional 2 members in the metagenomic datasets is represented in Bacteria. The first structural representative solved (PDB Id: TOPSAN:2g7j) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1kafa_ classified as Mota C-terminal domain-like fold. However, no sequence similarity to this fold has been detected. Based on fold one can hypothesize that this family is probably binds DNA, possibly a transcription factor

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