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The Open Protein Structure Annotation Network
PDB Keyword
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PF09410

    Table of contents
    1. 1. Topsan Members
    2. 2. Summary
    Live PFAM
    Name: Accession: PF09410 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB: 
      

    Topsan Members

    Tag pages as 'PF09410' to appear in this list.

    Name Annotation Author(s)
    2ich
    Gene NE1406 from Nitrosomonas europaea encodes the NP_841447 protein that belongs to the DUF2006 group (PF09410) with over 400 homologs in bacteria, archaea and fungi. Pfam DUF2006 family overlaps wit... tinab (40 edits)
    adam (6 edits)
    tinaAdmin (2 edits)

    Summary

    Pfam family PFAM:PF09410 {Proteins of unknown function (DUF2006) } with 415 members in NR database and additional 330 members in the metagenomic datasets is represented in Archaea, Bacteria, and Eukaryota. The first structural representative solved (PDB Id: TOPSAN:2ich) was subject to FATCAT structural similarity search that indicated similarity to SCOP (v. 1.73) domain SCOP:d1jmxa5 classified as Streptavidin-like fold. (Note: duplication). Based on prediction by HHpred (confirmed by the structure) links it to PF07930 that has Streptavidin-like fold one can argue that this family is remotely homologous to previously known structures from 'd1jmxa5' this fold.

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