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PDB Keyword


    Table of contents
    1. 1. Topsan Members
    2. 2. Summary

    Live PFAM
    Name: Accession: PF11838 (PFAM live)
    # sequence matches: # architectures:
    # taxonomy ids: PDB:  1z1w1z5h2yd03mdj3q7j

    Pfam ID: DUF3358 PDB: 1z1w_A
      Top FFAS hit in PDB: "1z1wA, Tricorn protease interacting factor F3" Top FFAS hit in Pfam: "PF11940, Domain of unknown function (DUF3458) "
      Top significant hit (PDB90): "3qnfA, hydrolase ; crystal structure of the open state of human endoplasmic reticulum aminopeptidase 1 erap1 "
      Top significant hit (PFAM25U): "PF01347, Lipoprotein amino terminal region"
    CATH: CATH Domain E-value CATH Node
      1z1wA04 1.30E-58
      1lshA02 0.0055
      1oyzA00 0.01
    PUBSERVER: (view)
      Publications(s) found: 1352
      Publications(s) meeting filtering criteria: 130
    GeneSilico Metaserver
      PDBBLAST PDB: 2xdt_A ECC: 3.4.11.-
      BLASTP PDB: 2xdt_A ECC: 3.4.11.-
      HHBLITS PDB: 3se6_A ECC: 3.4.11.-
      COMPASS PDB: 1z1w_A SCOP : predicted d.92.1 ECC: 3.4.11.-
      CSBLAST PDB: 2xdt_A ECC: 3.4.11.-
      HHSEARCH PDB: 3se6_A ECC: 3.4.11.-

    Topsan Members

    Tag pages as 'PF11838' to appear in this list.

    No TOPSAN member(s) found.


    DUF3358 is an uncharacterized domain found at the C-terminus of zinc metallopeptidase belonging to MEROPS peptidase family M1. In ERAP1 this domain might be pulled away from the active site and thereby making it accessible to substrates.

    It is probably should be called Pept_M1_aminopeptidase_C or ERAP1_C.




    No references found.

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