.
The Open Protein Structure Annotation Network
PDB Keyword
.

Q15413

    Q15413 Annotations
    Resources: GeneCardsLocal Structure PredictionUNIPROTPFAM, Interpro
     


    Q15413 1464-1662 Putative Domain Summary

    Aravind told me this region is just an extension of the more C-terminal domain.

    Q15413 1464-1662 Domain Information
    Sequence Length: 199 Sequence Local Structure Prediction # Uniprot Refs: 6
    N-terminal boundary: pfamA domain C-terminal boundary: disordered region
    Is region cluster seed?: Yes   Cluster Size: 3  
    HMMER:
      # sequence matches: 98 # architectures: 23 # taxonomy ids: 46
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q15413 1796-1932 Putative Domain Summary

    Your annotation here.

    Q15413 1796-1932 Domain Information
    Sequence Length: 137 Sequence Local Structure Prediction # Uniprot Refs: 6
    N-terminal boundary: disordered region C-terminal boundary: disordered region
    Is region cluster seed?: Yes   Cluster Size: 3  
    HMMER:
      # sequence matches: 98 # architectures: 20 # taxonomy ids: 46
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q15413 2279-2583 Putative Domain Summary

    Your annotation here.

    Q15413 2279-2583 Domain Information
    Sequence Length: 305 Sequence Local Structure Prediction # Uniprot Refs: 6
    N-terminal boundary: disordered region C-terminal boundary: psi-blast hit in PDB
    Is region cluster seed?: No   Cluster Size: 3  
    HMMER:
      # sequence matches: 103 # architectures: 22 # taxonomy ids: 47
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q15413 2858-3227 Putative Domain Summary

    This region is also an extension of a neighboring domain.

    Q15413 2858-3227 Domain Information
    Sequence Length: 370 Sequence Local Structure Prediction # Uniprot Refs: 6
    N-terminal boundary: disordered region C-terminal boundary: disordered region
    Is region cluster seed?: Yes   Cluster Size: 4  
    HMMER:
      # sequence matches: 108 # architectures: 23 # taxonomy ids: 48
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q15413 3366-3468 Putative Domain Summary

    Your annotation here.

    Q15413 3366-3468 Domain Information
    Sequence Length: 103 Sequence Local Structure Prediction # Uniprot Refs: 6
    N-terminal boundary: disordered region C-terminal boundary: psi-blast hit in PDB
    Is region cluster seed?: No   Cluster Size: 3  
    HMMER:
      # sequence matches: 101 # architectures: 22 # taxonomy ids: 44
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q15413 4771-4870 Putative Domain Summary

    Your annotation here.

    Q15413 4771-4870 Domain Information
    Sequence Length: 100 Sequence Local Structure Prediction # Uniprot Refs: 6
    N-terminal boundary: transmembrane helix C-terminal boundary: c-terminus
    Is region cluster seed?: Yes   Cluster Size: 7  
    HMMER:
      # sequence matches: 353 # architectures: 52 # taxonomy ids: 85
    FFAS:
      Top FFAS hit in PDB: Zinc finger BED domain containing protein 1
      No significant hits in Pfam.
    GRDB


    Topsan Members

    Tag pages as 'Q15413' to appear in this list.

    No TOPSAN member(s) found.

    Reviews

    References

     

    No references found.

    Files (0)

     
    You must login to post a comment.
    All content on this site is licensed under a Creative Commons Attribution 3.0 License
    Powered by MindTouch