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The Open Protein Structure Annotation Network
PDB Keyword
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Q8NCM8

    Q8NCM8 Annotations
    Resources: GeneCardsLocal Structure PredictionUNIPROTPFAM, Interpro
     

    Q8NCM8 1-147 Putative Domain Summary

    Looks like an extension of PFAM domain DHC_N1 (PF08385) (on the N-terminal end). On the other hand, there are few proteins where this domain appears alone or even as a duplicate. Would need to check gene predictions for those

     

    Q8NCM8 1-147 Domain Information
    Sequence Length: 147 Sequence Local Structure Prediction # Uniprot Refs: 7
    N-terminal boundary: n-terminus C-terminal boundary: disordered region
    Is region cluster seed?: Yes   Cluster Size: 1  
    HMMER:
      # sequence matches: 33 # architectures: 10 # taxonomy ids: 25
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q8NCM8 669-955 Putative Domain Summary

    Looks like an extension of PFAM domain DHC_N1 (PF08385) (on the C-terminal end). On the other hand, there are few proteins where this domain appears alone or even as a duplicate. Would need to check gene predictions for those

     

    Q8NCM8 669-955 Domain Information
    Sequence Length: 287 Sequence Local Structure Prediction # Uniprot Refs: 7
    N-terminal boundary: pfamA domain C-terminal boundary: disordered region
    Is region cluster seed?: Yes   Cluster Size: 1  
    HMMER:
      # sequence matches: 89 # architectures: 23 # taxonomy ids: 65
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


    Q8NCM8 3479-3609 Putative Domain Summary

    Looks like a conserved linker between PFAM domains ATP-binding dynein motor region D5 (PF12781) and Dynein_heavy chain and region D6 of dynein motor (PF03028). There are few short proteins which contain only this domain. Would need to check gene predictions for those

    Q8NCM8 3479-3609 Domain Information
    Sequence Length: 131 Sequence Local Structure Prediction # Uniprot Refs: 7
    N-terminal boundary: psi-blast hit in PDB C-terminal boundary: pfamA domain
    Is region cluster seed?: No   Cluster Size: 11  
    HMMER:
      # sequence matches: 978 # architectures: 121 # taxonomy ids: 103
    FFAS:
      No significant hits in PDB.
      No significant hits in Pfam.
    GRDB


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