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    Table of contents
    1. 1. Protein Summary
    2. 2. Ligand Summary

    Title Structure and intracellular targeting of the SARS-coronavirus Orf7a accessory protein. Structure 13 75-85 2005
    Site MCSG
    PDB Id 1xak Target Id APC35380
    Molecular Characteristics
    Source Sars coronavirus urbani
    Alias Ids TPS5491,AAP13449, 228330 Molecular Weight 13940.56 Da.
    Residues 122 Isoelectric Point 8.24
    Sequence mkiilfltlivftscelyhyqecvrgttvllkepcpsgtyegnspfhpladnkfaltctsthfafacad gtrhtyqlrarsvspklfirqeevqqelysplflivaalvflilcftikrkte
      BLAST   FFAS

    Structure Determination
    Method XRAY Chains 1
    Resolution (Å) 1.80 Rfree 0.275
    Matthews' coefficent 2.34 Rfactor 0.223
    Waters 142 Solvent Content 47.34

    Ligand Information


    Google Scholar output for 1xak
    1. Structural insights into SARS coronavirus proteins
    M Bartlam, H Yang, Z Rao - Current opinion in structural biology, 2005 - Elsevier
    2. A Combined QM/MM Poisson_ Boltzmann Approach
    SA Hayik, N Liao, KM Merz Jr - Journal of Chemical Theory and , 2008 - ACS Publications
    3. Solution structure of the X4 protein coded by the SARS related coronavirus reveals an immunoglobulin like fold and suggests a binding activity to integrin I domains
    K Hnel, T Stangler, M Stoldt, D Willbold - Journal of biomedical science, 2006 - Springer
    4. PURY: a database of geometric restraints of hetero compounds for refinement in complexes with macromolecular structures
    M Andrejasic, J Praznikar, D Turk - Acta Crystallographica Section D: , 2008 - scripts.iucr.org
    5. Development of a Parametrized Force Field To Reproduce Semiempirical Geometries
    AM Wollacott, KM Merz Jr - Journal of Chemical Theory and , 2006 - ACS Publications
    6. A novel force field parameter optimization method based on LSSVR for ECEPP
    Y Liu, L Tao, J Lu, S Xu, Q Ma - FEBS letters, 2011 - Elsevier
    7. Dimensionality reduction in computational demarcation of protein tertiary structures
    RR Joshi, PR Panigrahi, RN Patil - Journal of Molecular Modeling, 2011 - Springer
    8. Amino-acid-dependent main-chain torsion-energy terms for protein systems
    Y Sakae, Y Okamoto - Arxiv preprint arXiv:1206.3909, 2012 - arxiv.org
    9. Optimizations of protein force fields
    Y Sakae, Y Okamoto - Arxiv preprint arXiv:1208.6150, 2012 - arxiv.org

    Protein Summary

    Ligand Summary




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