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The Open Protein Structure Annotation Network
PDB Keyword
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Template:Nettles

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    Target Information
    Name {{ args.name}} {{ web.link{uri: "http://ffas.burnham.org/XtalPred-cgi/result.pl?dir=db/JCSG/kn/"..args.name, text: 'XtalPred result (for one isoform)', title: params['targetId'], target: "_blank"}  }}
    Sequence  {{params['seq']}}
     
    {{web.link('http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=(none)&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&HITLIST_SIZE=500&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&QUERY='..params['seq'], 'BLAST', 'BLAST', '_blank');}}   {{web.link('http://ffas.burnham.org/ffas-cgi/cgi/ffas.pl?seq='..params['seq'], 'FFAS', '', '_blank'); }}
    {{Template.constructList{cList:constList}}} {{Template.complexPartnersFle{cmList:cmplxList, rcmlist: rcmplxlist}}}
    {{Template.uniprot{uniprot:params['name']}}}
    var domainparams = myproteins.recordlist('select * from pfamdomainsnet where targetName = \''..params.uniprot..'\'');
    var newseq = string.replace(params['seq'], ' ', '');
    var pdbparams = myproteins.recordlist('select * from pdbdomainsnet where targetName like \'%'..params['name']..'%\' order by start');
    
    
    domain.viewer(domainparams, pdbparams, #newseq, params['name'], 'net');
    note.link( 'alias', params['name'], false);
    

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