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The Open Protein Structure Annotation Network
PDB Keyword
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    dekiapi('0.2');
    template('PubMed/Styles');
    
    /**
     * Search form
     */
    <form ctor="
            var timeout;
            var processing;
    
            // make sure the dialog has been initialized
            Popup.init({defaultKeyListeners: false});
            // remove default popup handlers
            if (Popup.removeDefaultEventHandler) {
                    Popup.removeDefaultEventHandler();
            }
    
            when(#pubmedsubmit.click) {
                    processing = true;
                    #pubmedterm.addClass('loading');
    
                    var query = Deki.$.trim(#pubmedterm.val());
                    MindTouch.Deki.Reload('#pubmedresults', { term: query }, function() {
                            processing = false;
                            #pubmedterm.removeClass('loading');
    
                            if (query != Deki.$.trim(#pubmedterm.val()) ) {
                                    #pubmedsubmit.click();
                            } else {
                                    // hook clicks
                                    #pubmedresults.find('li.pubmeditem').click(function() {
                                            // grab the pmid
                                            var pmid = $(this).find('.pmid').text();
                                            var title = $(this).find('.title').text();
                                            @pubmedsubmit({
                                                    'pmid': pmid,
                                                    'title': title
                                            });
                                    });
                            }
                    });
                    return false;
            }
    
            when(#pubmedterm.keypress || (#pubmedterm.keydown && $event.keyCode == 8 /* backspace */)) { {
                            if (timeout) clearTimeout(timeout);
    
                    if ($event.keyCode == 13) {
                            @pubmedsearch();
                            return false; // prevent default
                            } else {
                                    timeout = setTimeout(function() { @pubmedsearch(); }, 1000);
                            }
            } }
    
            when(@pubmedsearch && !processing) { {
                    var query = Deki.$.trim(#pubmedterm.val());
                    if (query.length == 0 || query.length >= 3) {
                            #pubmedsubmit.click();
                    }
            } }
    
            when(@pubmedsubmit) {
                            var PubMedDialogConfig = Popup.getParams();
                            // config comes from parent editor plugin
                            var pagePath = PubMedDialogConfig.pubmedArticlePath + @pubmedsubmit.pmid;
                            var templatePath = PubMedDialogConfig.pubmedArticleStubPath;
    
                    // create the discussion stub if it doesn't exist
                    // TODO: need to pass pmid to template
                    var page_api = MindTouch.Plugin.PubMed.GetPageApi(Deki.Env.SiteApi, pagePath);
                    var template_api = MindTouch.Plugin.PubMed.GetPageApi(Deki.Env.SiteApi, templatePath, {pmid: @pubmedsubmit.pmid});
                    MindTouch.Plugin.PubMed.CreatePageFromTemplate(page_api, template_api,
                            function(xhr)
                            {
                                    Popup.close(@pubmedsubmit);
                            },
                            function(error)
                            {
                                    if (error.status == 409) {
                                            // page already created
                                            Popup.close(@pubmedsubmit);
                                    } else if (error.status == 403) {
                                            alert('The reference cannot be inserted because a corresponding article page does not yet exist and could not be created.');
                                    } else {
                                            alert('An error occurred trying to create the article at ' + pagePath + ' (status: ' + error.status + ' - ' + MindTouch.Web.GetStatusText(error.status) + ')');
                                    }
                            }
                    );
                    return false;
            }
    
        " >
        // end ctor
    
            // search tools div
            <div id="pubmedsearchtools">
                    // input search box
                    <input id="pubmedterm" type="text" />
    
                    // input button
                    <input id="pubmedsubmit" type="submit" value="Search" />
                    <span class="hint">"Enter a keyword, ISBN or PubMed number to search for references."</span>
            </div>
    </form>
    
    // this is the <div> that shows the results
    <div id="pubmedresults">
        if(#__request.args.term > 0) {
            template('PubMed/ESearch', [__request.args.term, 15]);
        }
    </div>
    

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