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The Open Protein Structure Annotation Network
PDB Keyword
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Template:Williamson

    Table of contents
    No headers
    Target Information
    Name {{ args.name}} {{ web.link{uri: "http://ffas.burnham.org/XtalPred-cgi/result.pl?dir=db/JCSG/wil/"..params['targetId'], text: 'XtalPred result (for one isoform)', title: params['targetId'], target: "_blank"}  }}
    Length {{ params['length'] }} Gravy Index {{ params['gravIx'] }}
    Instability Index (II) {{ params['instabIx'] }} Isoelectric Point (pI) {{ params['isopt'] }}
    Coiled coils {{ params['coil'] }} Longest disordered region {{ params['longdisorder'] }}
    % of coil structure {{ params['pcntcoil'] }} Transmembrane helices (TM) {{ params['transhelix'] }}
    Signal Peptides (SP) {{ params['sigpeptide'] }} Insertions Score {{ params['insertscore'] }}
    Domains, Predictions {{params['domain'] }}
    Sequence  {{params['seq']}}
      {{web.link('http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=(none)&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&HITLIST_SIZE=500&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&QUERY='..params['seq'], 'BLAST', 'BLAST', '_blank');}}   {{web.link('http://ffas.burnham.org/ffas-cgi/cgi/ffas.pl?seq='..params['seq'], 'FFAS', '', '_blank'); }}
    {{Template.constructList{cList:constList}}} {{Template.complexPartners{cmList:cmplxList, rcmlist: rcmplxlist}}}
    if ( params.uniprot != nil && params.uniprot != '' ) {
        note.link( "sameAs", "UNIPROT:"..params.uniprot, false);
        note.import( 'uniprot:'..params.uniprot );
        template.uniprot{ uniprot:params.uniprot };
    }
    

    {{ web.image("http://files.topsan.org/cdd/"..page.title..".png") }}

    var domainparams = myproteins.recordlist('select * from all_domains where targetName like \'%'..params['name']..'%\'');
    var newseq = string.replace(params['seq'], ' ', '');
    var pdbparams = myproteins.recordlist('select * from pdbdomainsWil where targetName like \'%'..params['name']..'%\' order by start');
    
    domain.viewer(domainparams, pdbparams, #newseq, params['name'], 'wil');
    note.link('alias', params['name'], false);
    
    

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