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The Open Protein Structure Annotation Network
PDB Keyword
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Template:duf testc

    Table of contents
    No headers
    Resources
    {{ var msg = "No hits"; if (#params > 0) let msg = "Multiple hits"; msg; }} {{ if (#params > 0) CollapseItem{id:"duf_resources",effect:"slide"};}}
    Pfam ID: {{ params.pfid }} PDB: {{ var pdb = string.substr(dufstopdb.pdb_chain, 0, 4); web.link("http://www.rcsb.org/pdb/explore/explore.do?structureId="..pdb, dufstopdb.pdb_chain, "PDB", "_blank"); }}
    Solved by: {{ params.center}}    
    {{ web.link{ uri:'http://ffas.burnham.org/ffas-cgi/cgi/get_mu.pl?rv=PFAM25U*PDB0811*re*'..args.pfid, text: 'FFAS:', title: 'FFAS', target: '_blank'}; }}
      {{ if(params.ffasPDB != '') { web.html('<font color=\"#808080\">Top FFAS hit in PDB: </font>'); } else { web.html('<font color=\"#808080\">No significant hits in PDB. </font>'); } }} {{ params.ffasPDB}} {{ if(params.ffasPfam != '') { web.html('<font color=\"#808080\">Top FFAS hit in Pfam: </font>'); } else { web.html('<font color=\"#808080\">No significant hits in Pfam. </font>'); } }} {{ params.ffasPfam}}
    GRDB
      Top significant hit (PDB90): {{params.metapdb}}
      Top significant hit (PFAM25U): {{params.metapfam}}
    CATH: CATH Domain E-value CATH Node
      {{web.link{ uri:'http://www.cathdb.info/domain/'..string.trim(cathobj.domain), text: cathobj.domain, title: cathobj.domain, target: '_blank'}; }} {{cathobj.eval}} {{web.link{ uri:'http://www.cathdb.info/cathnode/'..cathobj.node, text: cathobj.node, title: cathobj.node, target: '_blank'}; }}
    FUNFAM (eval={{params.funeval}}): {{params.funfam}}
    {{web.link(paramspubserv.link, "PUBSERVER:", "PUBSERVER", "_blank");}}
      Publications(s) found: {{paramspubserv.pubs_found}}
      Publications(s) meeting filtering criteria: {{paramspubserv.pub_refs_num_proteins}}
    {{web.link(genes.uri, "GeneSilico Metaserver:", "GeneSilico Metaserver", "_blank");}} (Login and password: Jamboree)
    {{firsttd}} {{ if (db == 'PDB'){ db .. ': '; web.link('http://www.rcsb.org/pdb/explore/explore.do?structureId='..string.substr(dbid, 0, 4), dbid, 'PDB', '_blank'); } else if(db == 'SCOP'){db..' : '; web.link('http://scop.mrc-lmb.cam.ac.uk/scop/search.cgi?sccs='..string.replace(dbid, "predicted ", ""), dbid, 'SCOP', '_blank');}else{ current_db; } }}
    E.coli Annotations
    {{web.link("http://www.ncbi.nlm.nih.gov/protein/"..gene_locus.gi, "NCBI:", "NCBI", "_blank");}} {{gene_locus.gi}} {{web.link("http://porteco.org/AjaxSearch.jsp?searchString="..gene_locus.gene_name, "PORTECO:", "PORTECO", "_blank");}} {{gene_locus.gene_name}} {{web.link("http://genexpdb.ou.edu/main/?query="..gene_locus.locus_tag, "GeneExpDB:", "GeneExpDB", "_blank");}} {{gene_locus.locus_tag}}

    Reviews

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