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The Open Protein Structure Annotation Network
PDB Keyword
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Template:transportpdb

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    Target Information
    Name {{ args.name}} {{web.link('http://ffas.burnham.org/ffas-cgi/cgi/get_mu.pl?ses=&rv=Transporter*PDB0111-r*pb*'..args.name, 'Models', 'Models', '_blank')}}  
    Family {{ params['family'] }} Symbol {{ params['symbol'] }}
    tcid {{ params['tcid'] }} Alias {{ params['alias'] }}
    Protein Name {{ params['protname'] }} Accession {{ params['accession'] }}
    Length {{ params['len'] }} Molecular Weight {{ params['molwt'] }}
    TMS {{ params['tms'] }} Location {{ params['location'] }}
    Header {{params['header'] }}
    Sequence  {{var tstr = params['seq']; var len = string.length(tstr); var iternum = 0; var iter = 85; if (len > iter) { let iternum = len/iter; } foreach(var ctr in num.series(1, iternum)) { let tstr = string.insert(tstr, ' ', ctr*iter);  } tstr;}}
      {{web.link('http://www.ncbi.nlm.nih.gov/blast/Blast.cgi?CMD=Web&LAYOUT=TwoWindows&AUTO_FORMAT=Semiauto&ALIGNMENTS=250&ALIGNMENT_VIEW=Pairwise&CLIENT=web&COMPOSITION_BASED_STATISTICS=on&DATABASE=nr&CDD_SEARCH=on&DESCRIPTIONS=500&ENTREZ_QUERY=(none)&EXPECT=10&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&HITLIST_SIZE=500&I_THRESH=0.005&MATRIX_NAME=BLOSUM62&NCBI_GI=on&PAGE=Proteins&PROGRAM=blastp&RUN_PSIBLAST=on&SERVICE=plain&SET_DEFAULTS.x=36&SET_DEFAULTS.y=5&SHOW_OVERVIEW=on&END_OF_HTTPGET=Yes&QUERY='..params['seq'], 'BLAST', 'BLAST', '_blank');}}   {{web.link('http://ffas.burnham.org/ffas-cgi/cgi/ffas.pl?seq='..params['seq'], 'FFAS', '', '_blank'); }}
     

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